EternaFold is a multitask-learning-based model trained on EternaBench data, which demonstrates improved predictions both on molecules from Eterna as well as completely independent datasets of viral genomes and mRNAs.

The source code can be downloaded from https://github.com/eternagame/eternafold.

If you use EternaFold in your research, please cite: Wayment-Steele, H.K., Kladwang, W., Strom, A.I. ... Das, R. RNA secondary structure packages evaluated and improved by high-throughput experiments. Nat Methods 19, 1234–1242 (2022).